6 months for MDR-TB
HD: high dose; RIF: rifampicin; INH: isoniazid; RFP: rifapentine; ETM: ethambutol; PZA: pyrazinamide; MFX: moxifloxacin; LFX: levofloxacin; LZD: linezolid; ETH: ethionamide; BDQ: bedaquiline; DLM: delamanid; Pa: pretomanid; CFZ: clofazamine; Kan: kanamycin; Pro: prothionamide; Pl: Placebo. # : ClinicalTrials.gov identifier. Information from [ 1 , 104 ].
While many of these trials demonstrate promise for an improved approach to TB treatment, it is essential that we see long-term data on their efficacy and relapse rates prior to implementing them on a global scale. The fear is that these patients may have excellent short-term results, but disease recurs soon after with the added potential for drug resistance to develop.
In addition to shorter regimens, with new or re-purposed drugs, there is research into methods of modifying the host immune response to improve treatment outcomes and prevent permanent morbidity from TB disease. As previously discussed, upon infection with Mtb the host can either suppress bacillary replication into a latent state, or the host is overwhelmed and active disease develops [ 72 ]. Both deficient and hyperinflammatory states have been associated with TB disease morbidity and mortality, suggesting that tailoring a balanced immune response is of paramount importance to survival [ 73 ]. With evolving knowledge of the pathways and subcellular responses involved, new therapeutic targets are being developed to assist with bacillary quiescence in the so called “host directed therapy” approach [ 74 ]. Numerous drug targets have been suggested, largely centred on modulating macrophage activity [ 75 ]. Proposed adjunctive therapies include vitamin D, everolimus, auranofin and CC-11050, a novel anti-inflammatory compound. Preliminary results from trial data suggest none of these compounds improve rates of sputum conversion; however, patients in receipt of CC-11050 or everolimus had increased recovery of FEV 1 (forced expiratory volume in 1 s) post-treatment, perhaps solidifying the role of a balanced immune response to infection [ 76 ].
Going forward, with a combination of new drugs, altered durations and more effective testing of response to treatment, it is likely that each patient will have a tailored approach to TB treatment [ 49 ]. With studies like PredictTB, aiming to determine biomarkers and radiographic appearances that predict response and likelihood of relapse, we will be able to devise a drug combination and duration with greater specificity for each patient [ 77 ]. Similar technology may even assist with developing even more efficacious drugs in early-stage clinical trials [ 78 ]. Additionally, it is essential that any new drug or technology developed is affordable and available to all institutions, most importantly hospitals in low-resource environments, where the majority of the global TB burden persists.
Despite ongoing research, treatment for DS-TB has remained unchanged for decades. This highly effective regimen is often poorly tolerated by patients, and “drug holidays” are frequent during treatment. This, of course, increases the likelihood of relapse and evolution of drug resistance. Moreover, patients with resistant TB have to endure longer regimens with their own associated side-effects. While awaiting the development and approval of less toxic regimens, there are a number of measures we can take to ameliorate adverse effects of treatment and promote patient adherence. It has been shown that comprehensive patient-centred approaches, involving nutritional, financial and psychological support, have higher rates of completion. In addition, patients with increased contact with healthcare workers tended to have lower drop-out rates during treatment [ 79 ]. The evidence base for this is provided by systematic reviews of mostly observational case studies and case cohorts, and as such randomised research in this area is required to determine a formal link.
Directly observed therapy (DOT) has been a standard of care in TB treatment for several years. The premise is that patients are more likely to comply if medication ingestion is witnessed multiple times per week. Current recommendations are that it should be implemented in MDR- or XDR-TB cases, or for patients with complex or vulnerable care needs, such as homelessness, comorbid psychiatric illness or addiction [ 80 ]. There have been conflicting results from systematic reviews on the efficacy of DOT [ 81 , 82 ]. What is known, is that community-based DOT appears to be the most effective strategy, as it is less disruptive for patients and thus their adherence is more likely to be maintained [ 83 ]. In recent years, attention has switched towards the use of smartphone technology. Video observed therapy (VOT) has been suggested as an even less disruptive form of monitoring adherence [ 84 ]. Patients can either upload videos of medication ingestion to a secure platform to be watched at a later date, or it can be taken while on a live feed with their healthcare team. VOT has been shown to have a higher uptake rate and patient preference rating [ 85 ]. While plausible that this will improve adherence, and thus relapse should be less likely, this study was not sufficiently powered to assess this, nor did it follow up on relapse rates at an appropriate interval. A real-world efficacy and cost-effectiveness study is ongoing in a tertiary hospital in Ireland at present [ 86 ].
Undoubtedly, a burden of TB infection will persist for years to come. However, we have a chance to prevent many of these patients from progressing to active disease. Screening for TB infection in groups at high risk of progressing to TB disease remains a cost-effective and essential component to the global initiative. Screening via either of the endorsed interferon-γ release assays (QuantiFERON-TB Gold In-Tube and T-SPOT.TB) or traditional tuberculin skin testing is recommended in certain populations. The WHO has advised that clinical judgement is paramount in interpreting these tests, and cautions that a higher rate of false negatives occurs in the most vulnerable populations [ 87 ]. Another essential component of the sustainable development goals is robust public health policy to assist in contact tracing of index cases and early treatment of contacts. In addition, prior to any prophylactic treatment being commenced, it is essential that due caution is taken to rule out the presence of active TB disease.
Currently the WHO advocates for treatment with 4 months of RIF or 6–9 months of INH in cases where the index case is known to be drug sensitive [ 87 ]. A 3-month combination of RIF and INH is also approved, although rarely used due to potential toxicity. Additionally, weekly INH and RFP for 3 months has been shown to demonstrate equal efficacy and toxicity in comparison to 6 months of INH therapy, while higher levels of adherence were noted in the INH/RFP arm [ 88 ]. Moreover, a 1-month regimen of RFP/INH therapy was non-inferior to 9 months INH monotherapy in preventing TB in HIV-infected patients [ 89 ]. However, this regimen has yet to be endorsed by major international consortia.
The recommendations for TB contacts of DS-TB cases who demonstrate evidence of TB infection are as per those above. For contacts of MDR-TB cases, the current recommendation is for 6–12 months treatment with a FLQ with or without a second drug. If a FLQ cannot be used due to resistance in the index case, treatment with ETM and PZA is to be considered [ 87 ]. Regardless of the regimen in use, it is vital that strict adherence is maintained to ensure efficacy and prevent resistance.
At present, the decision to treat is based on the potential for progression to active disease based on similar case profiles. Going forward, we could vastly improve the cost efficacy of this intervention by being able to determine exactly which patients were going to progress to active TB disease or not. It had been hoped the answer would lie in serum transcriptional biomarkers and host response-based gene signatures [ 90 , 91 ]. Recently, a four-protein biomarker panel has shown 67.3% sensitivity and 96.3% specificity at determining active from latent TB [ 92 ]. This subclinical phase of TB disease can be difficult to interpret due to its lower inflammatory profile and person specific confounding factors that influence our immune response. Recent results from transcriptomic studies have been disappointing overall, but may potentially suggest a role for these panels in symptomatic patients with known TB infection and their risk of progression to TB disease in an imminent 6-month period [ 93 ].
Given the current prevalence of TB infection, with the associated lifetime risk of progressing to active disease, it is paramount that we protect future generations from this burden by halting transmission entirely. With greater understanding of the cellular processes involved in Mtb susceptibility and pathogenesis, scientists have been able to identify various potential targets with a role in vaccination. Central to this is the cellular immune response, with a need to upregulate T-helper cell (Th)1, and downregulate Th2 and regulatory T-cell responses [ 94 ]. It appears that Mtb has also recognised the need to adapt to this hypo-inflammatory phenotype with more modern strains displaying shorter latency and higher virulence than previously seen [ 95 ].
The only worldwide approved vaccine against TB remains bacillus Calmette–Guérin (BCG), effectively reducing the risk of severe childhood disease from TB, with an 85% reduction in TB meningitis and miliary TB in those <10 years of age [ 96 ]. It has also been noted that infants innoculated with BCG have increased survival and lower rates of other childhood infections. This observation is likely secondary to BCG's ability to prime innate immunity through epigenetic modification of innate immune cells [ 97 ].
Vaccination can be categorised into preventive pre-exposure, preventive post-exposure or therapeutic [ 98 ]. Vaccines can alternatively be classified according to their biochemical forms: live attenuated, inactivated, protein subunit or recombinant [ 99 ]. With each of these forms, the aim is to target various cells or subcellular components of TB pathogenesis.
MTBVAC, a pre-exposure live attenuated vaccine, has shown promising results from preclinical trials with a higher protection against TB than BCG [ 100 ]. This live vaccine is based on a genetically modified mutant Mtb strain containing deletions in transcription factors important for Mtb growth in macrophages and subsequent virulence.
VPM1002, another live recombinant BCG vaccine, is undergoing phase III studies at present to evaluate its efficacy at not only preventing infection, but in preventing active disease in those already affected [ 101 ]. This vaccine can modify T-cell immune response and enhance Th1 immunity, important in TB disease pathogenesis.
Another promising post-exposure candidate is M72/AS01E, a subunit vaccine, that prevents pulmonary TB in adults already infected with Mtb in 54% of patients, and thus could be a potentially life-saving intervention for one quarter of the world's population [ 102 ]. Also known as Mtb72F this vaccine comprises two immunogenic proteins that promote T-cell proliferation and interferon-γ release [ 103 ].
Further randomised control trials are warranted in a timely manner if the END TB strategy is to be achieved.
The future is bright for TB treatment. Never before has there been such a global effort to develop new technologies and treatment for TB patients. Combining these advancements, it is possible that we will base each patient's treatment on their own protein biosignatures in conjunction with the genomic expression of mutations in the Mtb strain they have been affected with. If we are to achieve our goal of global eradication of TB, it is essential that we continue to collaborate and share our expertise on an international scale to ensure each patient gets the appropriate treatment and support to overcome their TB diagnosis without significant morbidity.
Conflict of interest: C.M. Gill has nothing to disclose.
Conflict of interest: L. Dolan has nothing to disclose.
Conflict of interest: L.M. Piggott has nothing to disclose.
Conflict of interest: A.M. McLaughlin has nothing to disclose.
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Pulmonary Tuberculosis (TB) charts among the top ten infectious diseases worldwide, as per the World Health Organization (WHO). Although new treatments (anti-tuberculars and combinatorial therapy) are emerging, these treatments come with significant side-effects. Due to the recent COVID 19 pandemic, TB programs all over the world faced major setbacks, which demands revaluation of goals and assessment of milestones set for ‘End TB Strategy’ program devised by the WHO. This Topic aims to propel clinical as well as basic research in the area of TB treatment, disease management, drug discovery and understanding the metabolic re-modelling of Mycobactrium tuberculosis as a pathogen in response to various drugs. We aspire to reach new heights in diagnosis, treatment and control of the tuberculosis epidemic, worldwide. Potential subtopics for exploration include, but are not limited to: • Investigations of pathogenesis and determinants of TB • Comprehensive investigations into treatment/ drug discovery (and/or development) against pulmonary TB. • Advancements in vaccines, diagnostic methodologies for TB. • Innovative therapeutic approaches for patients with MDR/XDR TB. • Explorations into the molecular and genetic underpinnings of mycobacteria n context with metabolic responses to various drugs/lead molecules.
Keywords : Tuberculosis, Mycobacterium tuberculosis, Drug Discovery, Clinical Trials, Treatment, Disease management, Drug Resistance
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Tuberculosis (TB) research and innovation is essential to achieve global TB targets for reductions in TB incidence and TB deaths. The targets of the WHO End TB Strategy (1) , adopted in 2014, required a global rate of decline in TB incidence of 17% per year between 2025 and 2035, compared with a baseline level of 2% per year in 2015 and 10% per year by 2025 (the best achieved at national level, historically). It was recognized that such an unprecedented rate of decline from 2025 would require a major technological breakthrough by 2025, such as a new TB vaccine that is effective both before and after exposure to infection (2) . “Intensified research and innovation” is the third pillar of the End TB Strategy. The political declaration at the first UN high-level meeting on TB, held in 2018, included the first global funding target for TB research to be agreed by all UN Member States: US$ 2 billion per year in the period 2018–2022. Although funding has been slowly increasing ( Fig. 7.1 ), the latest published data show that only US$ 915 million was available in 2020 (3) , less than half of the global target.
WHO continues to promote and monitor progress in the development of new TB vaccines, diagnostics and medicines. The diagnostic pipeline has expanded considerably in terms of the number of tests, products or methods in development ( Table 7.1 ). These include molecular tests for the detection of TB disease and drug resistance, interferon gamma release assays (IGRAs) for the detection of TB infection, biomarker-based assays for detection of TB disease, computer-aided detection (CAD) for TB screening using digital chest radiography, and a new class of aerosol-capture technologies for detection of TB disease. Three new antigen-based skin tests for TB infection that perform better than tuberculin skin tests (particularly in terms of specificity) were evaluated and recommended by WHO in 2022; these are the Cy-Tb skin test, Serum Institute of India, India; C-TST, Anhui Zhifei Longcom Biopharmaceutical Co. Ltd, China; and Diaskintest, JSC Generium, Russian Federation. WHO plans to evaluate the following tests in the coming year: culture-free, targeted-sequencing solutions to test for drug resistance directly from sputum specimens; broth microdilution methods for drug-susceptibility testing (DST); and new IGRAs to test for TB infection. In September 2022, there were 26 drugs for the treatment of TB disease in Phase I, Phase II or Phase III trials ( Table 7.2 ). These drugs comprise 17 new chemical entities, two drugs that have received accelerated regulatory approval, one drug that was recently approved by the United States (US) Food and Drug Administration under the limited population pathway for antibacterial and antifungal drugs, and six repurposed drugs. Various combination regimens with new or repurposed drugs, as well as host-directed therapies, are in Phase II or Phase III trials.
Technologies in development | On the market (Not yet evaluated by WHO) | Technologies under evaluation by WHO | Technologies endorsed by WHO |
---|---|---|---|
antigen-based skin tests |
Phase I | Phase II | Phase III |
---|---|---|
Bedaquiline–delamanid–linezolid–levofloxacin–clofazimine (6-month oral regimen for RR-TB) or bedaquiline–delamanid–linezolid–clofazimine (6–9 month oral regimen for pre-XDR and XDR-TB) | ||
Bedaquiline–pretomanid–moxifloxacin–pyrazinamide (BPaMZ) | ||
Bedaquiline with two OBRs (all-oral, 9 months; with injectable, 6 months) | ||
Bedaquiline and delamanid with various existing regimens for MDR-TB and XDR-TB | ||
Bedaquiline-delamanid-linezolid-clofazimine for fluoroquinolone-resistant MDR-TB | ||
High-dose rifampicin and linezolid to reduce mortality among people with TB meningitis ( ) High-dose rifampicin to shorten drug-susceptible TB treatment ( ) High-dose rifampicin with standard regimen for drug-susceptible TB treatment ( ) | ||
Delpazolid dosing in combination With bedaquiline, delamanid, and moxifloxacin ( ) | Several 2-month regimens for drug-susceptible TB | |
High dose isoniazid for isoniazid-resistant or drug-susceptible TB ( ) | Short intensive treatment for children with TB meningitis (6 months of daily rifampicin, isoniazid, pyrazinamide and levofloxacin ( ) | |
Ultra-short treatment for fluoroquinolone sensitive MDR-TB ( ) | ||
PK, safety and tolerability of bedaquiline with OBR in HIV-infected and uninfected children with MDR-TB ( ) PK and safety of bedaquiline with OBR in HIV-uninfected children with MDR-TB ( ) | ||
PK, safety and tolerability of delamanid with OBR in HIV-infected and uninfected children with MDR-TB ( ) | ||
High-dose rifampicin for drug-susceptible TB ( ) High-dose rifampicin for TB meningitis ( ) | ||
Efficacy and tolerability of two doses of linezolid, combined with bedaquiline, delamanid, and clofazimine ( ) | ||
PK, safety, tolerability and acceptability of child-friendly formulations of clofazimine and moxifloxacin to treat children with RR-TB ( ) PK, safety, and acceptability of clofazimine in children with RR-TB | ||
Bedaquiline and pretomanid with existing and re-purposed anti-TB drugs for MDR-TB ( ) | ||
Efficacy and Tolerability of Bedaquiline, Delamanid, Levofloxacin, Linezolid, and Clofazimine ( ) | ||
Shorter regimens including clofazimine and rifapentine for drug-susceptible TB ( ) | ||
Pretomanid-containing regimens to shorten treatment for drug-susceptible TB ( ) | ||
Delamanid–linezolid–levofloxacin– pyrazinamide for fluoroquinolone- susceptible MDR-TB ( ) | ||
Levofloxacin with OBR for MDR-TB ( ) | ||
4-month treatment for drug-susceptible TB ( ) | ||
Multiple adjunctive host-directed TB therapies for drug-susceptible TB |
In September 2022, at least 22 clinical trials to evaluate drugs and drug regimens for treatment of TB infection were being implemented ( Table 7.3 ). Examples included trials for the prevention of drug-resistant TB among high-risk household contacts of TB patients with multidrug-resistant (MDR) and trials to assess how to optimize the administration of short-course TB preventive treatment (TPT) for very young children and people with HIV.
Phase I/II | Phase III/IV |
---|---|
Drug-drug interactions between rifapentine and dolutegravir in HIV and TB co-infected individuals | Efficacy and safety of 26 weeks of delamanid versus isoniazid to prevent TB among high-risk household contacts of MDR-TB patients |
3HP versus standard isoniazid preventive therapy among HIV-infected patients taking dolutegravir-based antiretroviral treatment | |
Study of dolutegravir-based ART and 3HP in children and adolescents living with HIV | Safety and efficacy of 3HP versus placebo to prevent TB in people with diabetes |
1HP versus 3HP with pharmacokinetics of dolutegravir among pregnant women with HIV | Short course rifapentine and isoniazid for the preventive treatment of genital TB |
Evaluating pharmacokinetics, tolerability, and safety of rifapentine and isoniazid in pregnant and postpartum women | Risk of systemic drug reactions (SDRs) during 3HP versus 1HP administration |
Six months of daily levofloxacin for the prevention of TB among children household contacts of people with MDR-TB | |
TB infection prevention study in HIV-exposed uninfected infants | Safety, tolerability, and effectiveness of 6 weeks of rifapentine to prevent TB infection |
Dose finding and safety study of rifapentine and isoniazid in HIV-infected and HIV-uninfected children with TB infection | 9H versus 3HP among people with rheumatic disease |
Higher dose rifampin for 2 months versus standard dose rifampin to treat TB infection | 1HP versus 3HP among people uninfected with HIV |
Short course rifapentine and isoniazid for prevention of TB among people with silicosis | Six months of daily levofloxacin for the prevention of TB among household contacts of people with MDR-TB |
Impact of 3HP on pharmacokinetics of tenofovir alafenamide | Evaluation of 3HP versus periodic 3HP versus 6H in people living with HIV |
In September 2022, there were 16 vaccine candidates in clinical trials: four in Phase I, eight in Phase II and four in Phase III ( Table 7.4 ). They include candidates to prevent TB infection and TB disease, and candidates to help improve the outcomes of treatment for TB disease. Effective vaccines are critical to achieve annual global and national reductions in TB incidence and mortality that are much faster than those achieved historically. WHO has commissioned a full-value assessment of new TB vaccines to guide investments in late-stage research as well the subsequent introduction and implementation of any that are licensed for use. Preliminary results suggest that vaccine products which meet the preferred product characteristics of new TB vaccines would have substantive and positive health and economic impacts.
Phase I | Phase IIa | Phase IIb | Phase III |
---|---|---|---|
McMaster, CanSino | University of Oxford | Gates MRI | Ministry of Health, Russian Federation |
RIBSP | Quratis U.S. NIH/NIAID | Dartmouth | ICMR, Cadila Pharmaceuticals |
BioNTech SE | Anhui Zhifei Longcom | SSI, Valneva, IAVI | Biofabri, University of Zaragoza, IAVI, TBVI |
GSK, Gates MRI | SIIPL, VPM | ||
Archivel Farma, S.L. | HJF | ||
ICMR |
Health Organization. Resolution WHA67.1. Global strategy and targets for tuberculosis prevention, care and control after 2015. Geneva: World Health Organization; 2014 ( http://apps.who.int/gb/ebwha/pdf_files/WHA67/A67_R1-en.pdf ).
Floyd K, Glaziou P, Houben R, Sumner T, White RG, Raviglione M. Global tuberculosis targets and milestones set for 2016–2035: definition and rationale. Int J Tuberc Lung Dis. 2018;22(7):723–30 ( https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6005124/ ).
Treatment Action Group, Stop TB Partnership. Tuberculosis research funding trends 2005–2020. New York: Treatment Action Group; 2021 ( https://www.treatmentactiongroup.org/wp-content/uploads/2021/12/tb_funding_2021.pdf ).
Gebreselassie N, Hutubessy R, Vekemans J, den Boon S, Kasaeva T, Zignol M. The case for assessing the full value of new tuberculosis vaccines. European Respiratory Journal. 2020;55(3):1902414 ( https://erj.ersjournals.com/content/erj/55/3/1902414.full.pdf ).
Global Strategy for Tuberculosis Research and Innovation (A75/10). Consolidated report by the Director-General. Seventy-fifth World Health Assembly. Geneva: World Health Organization; 2022 ( https://apps.who.int/gb/ebwha/pdf_files/WHA75/A75_10Rev1-en.pdf ).
Evidence and research gaps identified during development of policy guidelines for tuberculosis. Geneva: World Health Organization; 2021 ( https://www.who.int/publications/i/item/9789240040472 ).
Second WHO consultation on the translation of tuberculosis research into global policy guidelines. Geneva: World Health Organization; 2022 ( https://www.who.int/publications/i/item/9789240050907 ).
BRICS TB Research Network. See ( http://bricstb.samrc.ac.za ).
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Affiliation McGill University, Montreal, Quebec, Canada
Affiliation Emory University, Atlanta, Georgia, United States of America
Affiliation Stop TB Partnership, World Health Organization, Geneva, Switzerland
* E-mail: [email protected]
Systematic reviews are increasingly informing policies in tuberculosis (TB) care and control. They may also be a source of questions for future research. As part of the process of developing the International Roadmap for TB Research, we did a systematic review of published systematic reviews on TB, to identify research priorities that are most frequently suggested in reviews.
We searched EMBASE, MEDLINE, Web of Science, and the Cochrane Library for systematic reviews and meta-analyses on any aspect of TB published between 2005 and 2010. One reviewer extracted data and a second reviewer independently extracted data from a random subset of included studies. In total, 137 systematic reviews, with 141 research questions, were included in this review. We used the UK Health Research Classification System (HRCS) to help us classify the research questions and priorities. The three most common research topics were in the area of detection, screening and diagnosis of TB (32.6%), development and evaluation of treatments and therapeutic interventions (23.4%), and TB aetiology and risk factors (19.9%). The research priorities determined were mainly focused on the discovery and evaluation of bacteriological TB tests and drug-resistant TB tests and immunological tests. Other important topics of future research were genetic susceptibility linked to TB and disease determinants attributed to HIV/TB. Evaluation of drug treatments for TB, drug-resistant TB and HIV/TB were also frequently proposed research topics.
Systematic reviews are a good source of key research priorities. Findings from our survey have informed the development of the International Roadmap for TB Research by the TB Research Movement.
Citation: Nicolau I, Ling D, Tian L, Lienhardt C, Pai M (2012) Research Questions and Priorities for Tuberculosis: A Survey of Published Systematic Reviews and Meta-Analyses. PLoS ONE 7(7): e42479. https://doi.org/10.1371/journal.pone.0042479
Editor: Markus M. Heimesaat, Charité, Campus Benjamin Franklin, Germany
Received: April 23, 2012; Accepted: June 26, 2012; Published: July 27, 2012
Copyright: © Nicolau et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Funding: This work was supported in part by the Stop TB Partnership and World Health Organization. Dr Christian Lienhardt from the Stop TB Partnership and WHO provided input in study design and interpretation and revised the manuscript for intellectual content. Additional funding was provided by the European-Developing Countries Clinical Trials Programme (EDCTP; TB-NEAT grant). EDCTP had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
Competing interests: Madhukar Pai is a Section Editor with PLoS ONE. This does not alter the authors' adherence to all the PLoS ONE policies on sharing data and materials.
Tuberculosis (TB) continues to pose a major threat to global health [1] , and research is a key component of the Global Plan to Stop TB2011-2015 [2] . Research is particularly critical for developing new tools and approaches needed for eliminating TB by 2050 [3] . Recognizing this, the Stop TB Partnership and the World Health Organization's (WHO) Stop TB Department have launched the TB Research Movement, with the aim of boosting TB research and accelerating progress in TB control towards international targets [4] . One of the main outputs of the TB Research Movement in 2011 was the publication of the International Roadmap for Tuberculosis Research [5] in October of 2011. This roadmap outlines all priority areas for investment in TB research and is intended to promote coordination and harmonization of scientific work on TB. Research priorities are identified in the areas of epidemiology; fundamental research; R&D of new diagnostics, drugs and vaccines; and operational and public health research. The ultimate goal is to reach all populations, including people with TB/HIV co-infection or MDR-TB and children, with new and better methods of prevention, diagnosis and treatment [5] .
The process for developing this roadmap has been recently described by Lienhardt and colleagues [4] . Briefly, the research roadmap was developed through a priority ranking exercise conducted by a multidisciplinary group of 50 research experts, a multidisciplinary Delphi consultation, a series of systematic reviews and an open web-based survey [4] .Among the systematic reviews that were commissioned, one was focused on all the TB research agendas that have been published from 1998 to 2010 [6] . As a next step, we were commissioned to review all the published systematic reviews and meta-analyses on TB (in all areas, including drugs, vaccines, diagnostics), to assess what research priorities have been identified in these reviews. The objectives of our systematic review were as follows: (1) to identify all systematic reviews and meta-analyses pertaining to any aspect of tuberculosis from 2005 to 2010, and (2) to assess, compile and rank the research priorities that were identified.
MEDLINE, EMBASE, Web of Science, and the Cochrane Library were searched for systematic reviews and meta-analyses on TB. The search strategy was developed in consultation with a medical librarian. The search was limited to systematic reviews and meta-analyses published between January 1, 2005 and July 1, 2010, in order to focus on contemporary TB literature and identify research priorities of greatest relevance to current TB control.
The search strategy included the following keywords and MeSH terms: [‘tuberculosis’ (explode) OR ‘ Mycobacterium tuberculosis ’(explode) OR ‘tuberculosis’.ti,ab. OR ‘tuberculos*’.tw] AND [‘meta analysis’ (explode) OR ‘meta analyses’.ti,ab OR ‘meta-analyses’.ti,ab OR ‘meta-analysis’.ti,ab OR ‘metanalys*’.ti,ab OR ‘systematic review’.tw]. The search was not limited to English and the last search was performed on August 18, 2010.
Studies were included if they focused on any aspect of tuberculosis. We included systematic reviews and meta-analyses published in English, French, Spanish, and Italian. The languages included were based on the skill set of our research team. We included systematic review and meta-analyses that had focused on tuberculosis or on a tuberculosis related topic (e.g. BCG), in the title or abstract. We considered a study to be a systematic review or meta-analysis if the authors identified the study as such, or if the title or abstract contained the words “systematic review” or “meta-analysis”. Moreover, studies were regarded as systematic reviews if the authors reported a systematic, explicit approach to identify, select, and synthesize the available evidence.
The first screening of the titles and abstracts obtained following the electronic search was done by one reviewer (IN). Subsequently, the same reviewer (IN) screened the full text articles, determined the eligibility, and decided on the final inclusion of studies in the systematic review. Further, a second reviewer (MP) independently searched, screened and identified studies for the inclusion in the review.
We developed a data extraction form which was pilot-tested by two reviewers (IN and DL). The reviewers independently piloted the forms until there were no major disagreements in the data extraction process. One reviewer (IN) extracted the data from all the included studies and the second reviewer (DL) extracted data in duplicate for a random subset of 15% of the total number of included articles. Additionally, a third reviewer (LT) independently extracted data for all included studies on the study characteristics section of the data extraction form. Disagreements between the three reviewers were resolved by consensus.
We extracted data from the text or online supplement of each included systematic review or meta-analysis. Information was collected on two main points: i) the main focus of the systematic review, and ii) questions and priorities identified for future research. The UK Health Research Classification System (HRCS) [7] , developed by the UK Clinical Research Collaboration for the classification and analysis of all types of health research, was used to determine the focus of the included studies as well as the focus of the research questions/priorities. In particular, the HRCS Research Activity Codes [7] were used to assign a category for the main focus of the studies and the research questions/priorities.
The main focus of each included systematic review was determined by extracting keywords from the title and abstract and matching them with the criteria developed by the HRCS. The Codes were divided into eight major categories: (1) Underpinning research; (2) Aetiology; (3) Prevention of disease and conditions, and promotion of well-being; (4) Detection, screening and diagnosis; (5) Development of treatments and therapeutic interventions; (6) Evaluation of treatments and therapeutic interventions; (7) Management of diseases and conditions; and (8) Health and social care services research (see Table 1 for full description). These research categories were used in Tables 2 and 3 , to provide an overarching framework for grouping TB research.
https://doi.org/10.1371/journal.pone.0042479.t001
https://doi.org/10.1371/journal.pone.0042479.t002
https://doi.org/10.1371/journal.pone.0042479.t003
In the HRCS, each of the eight major categories is further subdivided into five to nine subcategories with definitions for the type of research that belonged to that subcategory. For instance, “(1)Underpinning research” includes five subcategories: (1.1)studies of normal biological development and functioning, including gene, gene products, biological pathways, molecular and cellular structures, and development and characterization of model systems; (1.2) studies that do not address health directly but cover issues such as psychological and socioeconomic processes, individual or group characteristics and behaviours, and social and cultural beliefs; (1.3) research in chemical and physical sciences that may lead to the future development of diagnostic tools or treatments; (1.4) studies that target the development of novel methodologies and measurements including the development of statistical methods, and the development of mapping methodologies; and (1.5)research involving the development and/or distribution of resources for use by the research community, and infrastructure to support research networks. Using the main categories and the subdivisions within each category, we mapped the corresponding TB research areas found in the literature search (refer to Tables 1 and 2 ).
Study characteristics were summarized using descriptive statistics. Measures such as total count, frequency, and proportion, were used to summarize data. Data analyses were performed using STATA Version 11.0.
There were a total of 973 records identified through the electronic database search ( Figure 1 ). The first screening of titles and abstracts was done on 680 records. Following the first screening process, 528 records were excluded. The reasons for exclusion are listed in Figure 1 . The full text screening of articles was performed on 152 records. Overall, there were 137 systematic reviews included in our analysis [8] – [144] .
https://doi.org/10.1371/journal.pone.0042479.g001
The 137 reviews were published in 61 different journals. The majority of reviews (39.4%) were published in journals with impact factors of five or less, and only six (4.3%) reviews were published in journals with a high impact factor (>15). However, a large proportion of the reviews (38.6%) were published in journals that did not have an impact factor. In addition, approximately 24% of the main authors were from the United States and 41% were from four other countries (China, UK, Canada, and Italy). The remaining 34.1% of authors were from 26 different countries.
Out of the 137 reviews, 131 (95.6%) self identified as a systematic review or meta-analysis, which means that they used the term “systematic review” or “meta-analysis” in the title or abstract. Approximately 91% (124) of all reviews were not Cochrane reviews. Among the 13 Cochrane reviews, 9 of them focused on “evaluation of treatments and therapeutic interventions”.
Half of the reviews (67 [48.9%]) reported having a funding source, whereas only 15 reviews (11.0%) reported not being funded and 55 reviews (40.1%) did not report funding status. Most of the reviews (109 [79.6%]) included less than 50 studies in their review and within those reviews, the majority had between 1,000 and 10,000 participants (34/109[31.2%]).
The main focus of each review was determined using the HRCS as described in the Methods section. The classification categories were subdivided into major tuberculosis research areas as described in Table 2 . The three most common review categories, in decreasing order, were “Detection, screening and diagnosis” with 46/141(32.6%) systematic reviews, “Development and evaluation of treatments and therapeutic interventions” with 33/141(23.4%) systematic reviews and “Aetiology” with 28/141(19.9%) systematic reviews.
Within the category of “Detection, screening and diagnosis”, 17/46 (37%) of the reviews focused on bacteriological diagnostics for active TB, such as improving processing methods of sputum smear microscopy, and assessing the use of nucleic acid amplification tests (NAATs). The two other most common TB research aims were bacteriological diagnostics for MDR-TB (9/46[20%]) and immunological diagnostics (9/46[20%]). More specifically, bacteriological diagnostics for MDR-TB included tests such as line-probe assays, bacteriophage based assays, and colorimetric redox assays. Immunological diagnostics were focused mainly on testing and evaluating interferon-gamma release assays (IGRAs).
In the category “Development and evaluation of treatments and therapeutic interventions”, 10/33 (30%) studies focused on drug resistant tuberculosis treatment, 9/33 (27.3%) studies on evaluating different regimen combinations for tuberculosis treatment, and 6/33(18.2%) on treatment of latent tuberculosis infection (LTBI).
In the category “Aetiology”, 11/28 (39.3%) systematic reviews focused on biological/genetic risk factors such as genetic susceptibility and gene targets,11/28 (39.3%) studies targeted surveillance and distribution of TB/HIV co-infection, MDRTB and HIV, and diabetes and TB, and 5/28(17.9%) focused on travel risk for LTBI and nosocomial TB exposure.
Out of 137 reviews, 103 (75%) identified at least one research question or a research priority. Of these, 48 (46.6%) identified only one research priority, 33 (32.0%) two research priorities, 7 (6.8%) three, 7 (6.8%) four, and 8 (7.8%) five research priorities. None of the reviews identified more than five research priorities.
Table 3 shows the summary of research priorities by category, subdivision, and TB-specific research priority. The three major categories of research priorities/questions were “Detection, screening and diagnosis” responsible for 50/191 (26.2%) of all the identified research priorities, “Aetiology” with 42/191 (22.0%), and “Evaluation of treatments and therapeutic interventions” with 37/191 (19.4%).
In the most common category, “Detection, screening and diagnosis”, the top research priority was the evaluation of bacteriological TB diagnostic tests in 14/50 (28.0%) reviews. Other frequently cited TB research priorities were: evaluation of immunological TB diagnostic tests (6/50 [12.0%]); discovery and development of new TB diagnostic tests (5/50 [10.2%]); and development of new bacteriological MDR-TB diagnostics (5/50 [10.2%]). Two priorities had almost equal importance and were highly prevalent in TB literature. The main priority in that category was to investigate the detection, screening and diagnosis of drug-resistant TB and MDR-TB. Studies called for the need to develop studies that detect resistance from smear positive specimens, determine the accuracy of colorimetric methods, line-probe assays, phage-based assays for rapid screening and nitrate reductase assay (NRA), and find the clinical usefulness of rapid diagnosis of rifampicin-resistant TB. Another frequency priority was to address unresolved research questions on interferon-gamma release assays (IGRAs), discover new antigens with immunodiagnostic potential, and test IGRAs in various populations and settings to establish test reproducibility. Evaluating sputum processing methods and smear microscopy, assessing nucleic acid amplification tests (NAATs), and evaluating tests for extrapulmonary TB (e.g. adenosine deaminase for pleural TB) were commonly cited priorities.
Within the “Aetiology” category, the main TB research priorities were: development of new research methods; better study designs or statistical tools for studying drug resistant TB, MDR-TB, links between HIV and MDR-TB; comparison of diagnostic tests (17/42 [40.5%]); identification of biological and genetic risk factors (15/42 [35.7%]); and evaluation of the role of risk factors such as tobacco and air pollutants (7/42 [16.7%]). The most frequent priority was to examine gene and gene products in relation to TB disease and susceptibility to disease. Key genes such as vitamin D receptor polymorphisms, IL10 gene, and drug-metabolizing enzyme (DME) gene polymorphisms were commonly mentioned for future research. The second most frequent research priority on TB/HIV included recommendations to conduct studies investigating XDR-TB and HIV co-infection, identifying a comprehensive definition of IRIS (immune reconstitution inflammatory syndrome), and investigating sputum processing methods with direct smears in settings with high and low HIV prevalence.
The category “Evaluation of treatments and therapeutic interventions” was the third most frequent. It focused on TB/HIV drug treatments (12/37 [32.4%]), drug-resistant TB treatments (11/37 [29.7%]), new TB drugs and active tuberculosis regimens (8/37[21.6%]). Implementing studies that evaluate new treatments and therapeutic interventions for drug-resistant TB, MDR-TB, and XDR-TB, was a prominent research priority. Such studies would need to examine methods to improve treatment outcomes for patients with XDR TB such as using later-generation fluoroquinolones, discovering methods to tailor treatment regimens for various forms of TB drug resistance, and investigating the use of quality-controlled laboratory testing for all first and second-line drugs that define XDR-TB. Another frequently cited priority was designing trials to evaluate the optimal duration of TB treatment, the influence of level of immunosuppression on effectiveness of TB drugs, and the combination of anti-TB chemoprophylaxis with antiretroviral therapy.
Systematic reviews and meta-analyses are widely acknowledged as a key component of the policy and guideline development process [145] . A large number of systematic reviews have been published in the area of TB diagnostics [146] , and these are increasingly being used for developing guidelines [147] . To this end, the Grading of Recommendations Assessment, Development and Evaluation (GRADE) tool has increasingly been adopted by policy makers and guideline developers to provide an explicit, comprehensive and transparent process for moving from evidence to recommendations [145] .
Systematic reviews often conclude by making suggestions for the direction of future research, and thus could be a good source for identifying the most important questions for TB research. Our survey collected descriptive information from all eligible systematic reviews and meta-analyses that were subsequently used to generate a list of research priorities in TB which were used for developing the International Roadmap for Tuberculosis Research [5] .
Our systematic search showed that a fairly high number of systematic reviews were published on TB during the period of 2005 to 2010. The findings of our review need to be interpreted along with a recent systematic review by Rylance and colleagues [6] on 33 articles with research agendas on TB. These authors found that the top priority areas for research were new TB drug development (28 articles), diagnosis and diagnostic tests (27), epidemiology (20), health services research (16), basic research (13), and vaccine development and use (13).
In our review of 137 TB systematic reviews, the top three categories for the focus of the research priorities/questions were “Detection, screening and diagnosis” “Aetiology” and “Evaluation of treatments and therapeutic interventions.” TB diagnosis and treatment were among the most important research priorities in both reviews. One possible reason of why TB diagnosis research ranked high on our list could be that our review focused on years 2005 to 2010, a period when major advances have been made in TB diagnostics, especially with IGRAs becoming a very popular subject of research [148] . Also, this time period saw the introduction of several WHO policies on TB diagnostics. Further, the emphasis on new tools in the Global Plan to Stop TB 2006–2015 [149] , along with the creation of product development partnerships such as the Foundation for Innovative New Diagnostics (FIND), AERAS, and Global Alliance for TB Drug Development, may have inspired research on new diagnostics and drugs.
The research priorities determined were mainly focused on the discovery and evaluation of bacteriological TB tests, drug-resistant TB tests and immunological tests, with special focus on IGRA tests. Also, tests for extra-pulmonary TB came up as a frequently cited priority in the Detection of TB category. Other important topics of future research were genetic susceptibility to TB and disease determinants attributed to HIV/TB. Evaluation of drug treatments for TB, drug-resistant TB and HIV/TB were also frequently proposed research topics. Many articles cited the need for improved and tailored treatment methods for MDR-TB and XDR-TB.
Although several systematic reviews identified areas for further research, the questions themselves were often framed in a generic way, rather than in a highly focused manner with specific recommendation for action. Future TB systematic reviews will need to be more focused, and propose highly specific, answerable questions that are amenable to well-designed research studies.
Our study has several limitations. Due to the poor overall quality of reporting of the systematic reviews, the findings may not be representative of the general output from the TB research community [150] . The inclusion of eligible studies was limited by the fact that we only reviewed articles in three other languages besides English. We were also unable to search ‘grey’ literature, contact authors, or hand search journals. The review also did not include any unpublished literature. Due to its overarching and generic nature, the Health Research Classification System categories were at times non-specific and difficult to match with specific areas of TB research. Furthermore, it was difficult to classify research priorities into narrow subdivisions since some research priorities could qualify for more than one subdivision. By categorizing research priorities into larger, predefined categories, we lost detailed information on individual research priorities. To remedy this, we condensed each priority and extracted the topic words from it. The topic words were then grouped together to form the summary of repeated priorities/questions and calculate the frequency.
There has been a lot of recent attention and focus on childhood TB, but because our search was last performed in 2010, our analysis may have missed research priorities in this important area.
In summary, our systematic review of published systematic reviews on TB helped identify several key priorities for future TB research. This exercise was useful to describe the landscape of TB research and the overarching TB research themes arising from systematic reviews and meta-analyses conducted over the last 5 years. Their scope is, however, limited, since systematic reviews themselves are influenced by current hot topics or new technologies. They are nevertheless useful in indicating research priorities on areas that receive high attention, either due to recent scientific developments or increasing questions surrounding advancement of knowledge in these very areas. They bring useful additional arguments and information to the broader, deeper and more rigorously conducted process of international research agenda development.
Conceived and designed the experiments: IN CL MP. Performed the experiments: IN DL LT. Analyzed the data: IN CL MP. Wrote the paper: IN MP.
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Background: Advancing a research agenda designed to meet the specific needs of children is critical to ending pediatric TB epidemic. Systematic reviews are increasingly informing policies in pediatric tuberculosis (TB) care and control. However, there is a paucity of information on pediatric TB research priorities. Methodology . We searched MEDLINE, EMBASE, Web of Science, and the Cochrane Library for systematic reviews and meta-analyses on any aspect related to pediatric TB published between 2015 and 2021. We used the UK Health Research Classification System (HRCS) to help us classify the research questions and priorities. Findings . In total, 29 systematic reviews, with 84 research questions, were included in this review. The four most common research topics in the area of detection were 43.33% screening and diagnosis of TB, 23.33% evaluation of treatments and therapeutic interventions, 13.34% TB etiology and risk factors, and 13.34% prevention of disease and conditions and promotion of well-being. The research priorities focused mainly on evaluating TB diagnosis by improving yield through enhanced in specimen collection or preparation and evaluating of bacteriological TB diagnostic tests. Other topics of future research were developing a treatment for TB in children, assessing the use of IPT in reducing TB-associated morbidity, evaluating the prioritization of an IPT-friendly healthcare environment, and providing additional guidance for the use of isoniazid in the prevention of TB in HIV-infected children.
Conclusion: There is a need for more systematic reviews on pediatric TB. The review identified several key priorities for future pediatric TB research mainly in the domain of (1) "Detection, screening and diagnosis," "Development of Treatments and Therapeutic Interventions," and "Prevention of Disease and Conditions, and Promotion of Well-Being." These domains are very relevant in the research component of the roadmap towards ending TB in children. It also will serve as an additional action in the WHO End TB strategy.
Copyright © 2022 Thomas Achombwom Vukugah et al.
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Tuberculosis (TB) is a contagious disease caused by infection with Mycobacterium tuberculosis ( Mtb ) bacteria. It is spread through the air when a person with TB disease of the lungs or throat coughs, speaks or sings, and people nearby breathe in these bacteria and become infected.
TB typically affects the lungs, but it can also affect other parts of the body, including the kidney, spine and brain. Not everyone infected with TB bacteria becomes sick. People who have latent TB infection have the TB bacteria in their bodies but are not sick and cannot spread the bacteria to others. Individuals with active TB disease, however, are sick and may also be able to transmit the bacteria to others. Many people with latent TB never develop active TB disease. For people with weakened immune systems, such as those living with HIV infection, the risk of developing TB disease is much higher than for those with normal immune systems. Both latent TB infection and active TB disease can be treated. Without treatment, latent TB infection can progress to TB disease, and without proper treatment, TB disease can kill.
Tuberculosis is the leading infectious cause of death worldwide. In 2017, 10 million people became ill with TB, and 1.6 million people died of TB disease including 230,000 children, according to the World Health Organization. Over the past 200 years, TB has claimed the lives of more than one billion people---more deaths than from malaria, influenza, smallpox, HIV/AIDS, cholera, and plague combined. Although TB treatment exists, drug resistance is a continued threat.
NIAID supports and conducts basic, translational and clinical research to better understand TB and expedite the development of innovative new tools and strategies to improve diagnosis, prevention and treatment of TB.
Tuberculosis is the second leading infectious cause of death worldwide. In the updated strategic plan, NIAID details four strategic priorities that are critical to the development and evaluation of the knowledge and tools needed to end TB globally.
A trial of a new drug regimen to treat tuberculous meningitis (TBM) has started enrolling adults and adolescents in several countries where tuberculosis (TB) is prevalent.
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WHO guideline development groups identify research questions using systematic reviews, economic analyses and stakeholder consultations during policy guidance development to identify urgent research gaps in the policy/implementation interface http://ow.ly/lUUw30nQZRO
High-quality research evidence is critical for improving global health and health equity, and for achieving the World Health Organization (WHO)'s objective of the attainment of the highest possible level of health by all peoples [ 1 ]. This need is most apparent when responding to complex epidemics such as tuberculosis (TB). TB is the leading killer among diseases caused by an infectious agent worldwide, the leading killer of people with HIV infection and a leading cause of death from airborne anti-microbial resistant infections, taking heavy tolls on human lives, communities and health systems at large [ 2 , 3 ]. WHO estimates that TB caused illness in 10 million people and claimed an estimated 1.6 million lives in 2017 alone [ 2 ]. The WHO End TB Strategy, in the context of the Sustainable Development Goals (SDGs), lays ambitious goals and milestones to end the epidemic by reducing incidence and mortality by 80% and 90% in 2030 compared to 2015: such reductions can only be achieved if there are major technological breakthroughs by 2025 [ 4 ].
Critical research is needed to acquire rapid point-of-care TB diagnostics, including for drug resistance; shorter, safer and simpler regimens effective against drug-susceptible and drug-resistant TB, as well as latent TB infection (LTBI) that are appropriate for treatment of TB/HIV co-infection; and a new TB vaccine that is effective both before and after exposure. These require scientific advances in the discovery and development of new biomedical tools, together with innovative delivery mechanisms to effectively adapt and adopt new technologies and optimise the necessary linkages and integrations with other health services and sectors. For this reason, “Intensified research and innovation” has been identified as one of the three essential pillars of the End-TB Strategy. This editorial summarises the research questions identified through recent WHO TB policy guidance to increase the quality of evidence for policy-making. Based on evidence arising from research, WHO is mandated to produce recommendations to guide clinical practice and public health policy for TB prevention and care in response to demand from public health decision makers. WHO guideline development groups (GDGs), which include researchers, the health workforce, civil society, as well as end-users of the guidelines, such as policymakers from government, professional associations and other constituencies, are appointed by WHO to develop policy guidelines [ 5 ]. A GDG meets with the primary objective of agreeing on the scope of recommendations by reviewing evidence, structured according to the standard framework of population, intervention, control, outcomes (PICO). This permits a systematic study of relevant evidence, the formulation of recommendations and the identification of knowledge gaps that need to be addressed through high quality research conducted in various epidemiological, demographic and geographic settings. The research questions highlighted in this document arose because the respective GDGs agreed they were critical for increasing the certainty/strength of existing recommendation, and/or for stimulating the development or optimisation of new recommendations that can lead to improvement in patient health and welfare. This step is an integral part of the WHO guideline development process (see, for example, the discussion section of F alzon et al . [ 6 ]).
Among the major challenges facing global policy guidance development in TB are the shortage of good quality evidence exacerbated, for example, by lack of sufficient clinical trials with direct evidence of clinical benefit or improvement in an established surrogate for clinical benefit; data inaccessibility including for programmatic experiences of benefits and safety of interventions in real world setting; or when the evidence being presented does not address broader questions of values and priorities that go beyond medical interventions ( e.g. acceptability, feasibility, resource distribution and health equity). Evidence obtained from well-designed, large scale multidisciplinary studies with robust testing of interventions are therefore needed to improve the strength of future guidance.
The most up-to-date WHO policy guidance documents for TB prevention and care are summarised in a Compendium of TB Guidelines and Associated Standards [ 7 , 8 ]. Using this compendium as a reference, we compiled a list of 155 research questions across the continuum of TB prevention, diagnosis, treatment and care (also summarised in table 1 ): three related to early detection; 35 related to diagnosis of TB disease, 10 related to the diagnosis and management of latent TB infection, 38 related to treatment of TB disease, including drug-resistant TB; 38 related to the management of TB/HIV and malnutrition; and 31 related to childhood TB management [ 10 ]. Because these research questions are limited in scope to needs identified during guideline development processes, the majority of the questions highlight gaps at the policy/implementation interface ( figure 1 ). Systematically linking such research questions to public health goals requires collaboration among funders, researchers and end users to ensure that funded research represents value for money, not only through the generation of new knowledge but also by contributing to health and economic outcomes. There are several ways of accomplishing that. The National Institute for Health Research Public Health Research Programme (NIHR PHR Programme) in the UK, for example, includes public health decision makers in its decision-making committee, and subsequently, the research it funds has been shown to align with priorities highlighted in national guidelines [ 11 ]. However, this is not the practice across all research funders. An exploratory qualitative study of funding strategy among five high-profile public health research funding organisations showed limited involvement from end users/policymakers in the prioritisation of research questions for funding [ 12 ]. Considering the need for well-funded, timely and high quality research for policy, funders should capitalise on opportunities to strengthen participation of policymakers and other end users in generating priority-driven research funding streams.
Representation of the research questions documented in World Health Organization tuberculosis (TB) policy guidance documents. BCG: bacille Calmette–Guerin; LTBI: latent TB infection; MDR-TB: multidrug-resistant TB; Hr-TB: isoniazid-resistant TB.
Research questions from the World Health Organization (WHO) tuberculosis (TB) policy guidance documents
At a time when there are many competing demands on limited resources, the WHO and its partners, countries, civil society and affected communities have a joint responsibility to ensure that TB research investments help achieve the goals and targets of the End TB Strategy and the SDGs. In recognition of this need, a TB resolution adopted at the World Health Assembly in May 2018 requested WHO to develop a global strategy for TB research and innovation, “to make further progress in enhancing cooperation and coordination in respect of tuberculosis research and development” [ 13 ]. Considering the significant funding gap for TB research (USD 1.3 billion gap in 2017 when benchmarked against the targets outlined in the Global Plan to End TB 2016–2020: the Paradigm Shift ), such coordination and collaboration is envisioned to help direct time and resources to the most urgent evidence needs faced by TB policymakers [ 14 – 16 ].
Conflict of interest: N. Gebreselassie has nothing to disclose.
Conflict of interest: D. Falzon has nothing to disclose.
Conflict of interest: M. Zignol has nothing to disclose.
Conflict of interest: T. Kasaeva has nothing to disclose.
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A major cause of death and disability worldwide, tuberculosis is a contagious lung disease that spreads through the air when people infected with it cough, sneeze, talk or spit. TB is caused by a bacterium called Mycobacterium tuberculosis , which usually attacks the lungs, but can affect other parts of the body like the kidney, spine and brain. The disease can be fatal if not treated properly.
According to the World Health Organization, there are almost 2 million TB-related deaths each year, and more than 9 million people around the world become sick with the disease annually. In 2009, almost 10 million children were orphaned as a result of parental deaths caused by TB. The spread of multidrug-resistant TB is a growing global threat, with hundreds of thousands of new cases emerging each year.
TB coinfection with HIV/AIDS is also a serious health issue and a leading cause of death worldwide among people with HIV. Several NIH research and research training programs are helping to reduce the impact of tuberculosis both in the U.S. and overseas.
Updated July 12, 2024
Implementation and scale-up of tuberculosis preventive treatment.
Tuberculosis, or TB, is an infectious bacterial disease caused by Mycobacterium tuberculosis, which most commonly affects the lungs. It is transmitted from person to person via droplets from the throat and lungs of people with the active respiratory disease. But people infected with TB bacilli will not necessarily become sick with the disease. The immune system "walls off" the TB bacilli which, protected by a thick waxy coat, can lie dormant for years. When someone's immune system is weakened, the chances of becoming sick are greater.
If properly treated, tuberculosis caused by drug-susceptible strains is curable in virtually all cases. If untreated, more than half the cases may be fatal within five years.
The DHS collects data on women's and men's knowledge and attitudes concerning TB. Over 90 surveys have included TB questions.
The Service Provision Assessment ( SPA ) survey collects data on TB diagnostic services, TB treatment, and/or follow-up services and facilities following DOTS (Directly-observed Treatment, Short-course) strategy and any treatment other than DOTS strategy.
Welcome to the fascinating world of quantitative biology, where biology, math, and technology blend to help us understand life better. Whether you’re a student, a science enthusiast, or just curious about how biology works at a deeper level, this guide will break down the key research areas in simple terms. Quantitative biology is all about using numbers, patterns, and computer models to figure out how living things behave, and we’re going to explore some of its most exciting topics. Let’s dive in!
Table of Contents
At its core, quantitative biology is the use of mathematical models, statistics, and computational tools to understand biological systems. It combines biology with math, providing a quantitative approach to solving biological problems. Whether predicting how a disease spreads or understanding genetic mutations, quantitative biology allows researchers to gain insights that would be impossible without the power of numbers.
For instance, imagine you’re studying how bacteria develop antibiotic resistance. Using mathematical models, you can predict how quickly resistance will spread in a population, helping scientists develop better treatments.
Quantitative biology plays a vital role in modern science. By blending biological science with quantitative methods, researchers can:
1. systems biology: the blueprint of life.
Systems biology is a key branch of quantitative biology that examines how different parts of a biological system interact to create its overall behavior. It studies biological networks—how genes, proteins, and cells communicate with one another. Using computational modeling, scientists simulate these interactions and predict what might happen if one part of the system changes.
For example, understanding how cancer spreads requires studying how cells interact and multiply. Systems biology helps researchers identify which proteins or genes are involved in these processes, enabling the development of targeted therapies.
Why It Matters:
Example Research Question:
Bioinformatics is a field of quantitative biology that applies computational modeling to the study of DNA and genetic data. It plays a central role in genomics, the study of an organism’s entire genetic makeup. Scientists use bioinformatics tools to analyze vast amounts of DNA and gene data, helping them find connections between genes and diseases.
For example, researchers use DNA analysis to identify mutations linked to conditions like diabetes or cancer. The data generated from sequencing entire genomes is immense, and bioinformatics is essential for making sense of it.
Population genetics is the study of how gene frequencies change in a population over time. It examines how natural selection, mutations, and genetic drift shape populations’ genetic makeup. Using mathematical models, population geneticists can predict how traits evolve and spread in a group of organisms.
For instance, a population of animals might adapt to a changing environment by developing thicker fur for colder climates. Population genetics helps scientists understand the genetic diversity that drives these changes.
4. Biophysics: The Physics Behind Life
Biophysics combines physics with biology to understand the physical principles governing biological processes. It focuses on the molecular dynamics of proteins, DNA, and other cellular components. Scientists use biophysics to study how proteins fold, how cells transmit signals, and how forces within cells affect their behavior.
One crucial area in biophysics is studying protein structure. When proteins fold incorrectly, it can lead to diseases like Alzheimer’s. Understanding these physical processes allows researchers to develop drugs that stabilize proteins and prevent misfolding.
In quantitative ecology, researchers use mathematical tools and environmental modeling to study ecosystems. By simulating how species interact with their environment and each other, ecologists can predict changes in biodiversity due to factors like climate change, pollution, or habitat destruction.
For example, if a new predator is introduced into an ecosystem, it can dramatically alter the populations of prey species. Quantitative ecology models help scientists understand these dynamics and develop strategies to protect endangered species.
Neuroscience focuses on understanding the structure and function of the brain, and quantitative biology plays a big role here. By studying brain networks and neural circuits, scientists can map out how neurons interact and how information flows through the brain. Neuroscience uses computational models to understand how these networks change when we learn or suffer from disorders like epilepsy.
For instance, researchers use quantitative models to simulate how neural circuits adapt during learning processes, providing insights into memory formation and decision-making.
Synthetic biology is an exciting field of biotechnology in which researchers design and create new biological systems or organisms. Using principles from genetic engineering, scientists can modify or build DNA sequences to produce new functions, like bacteria that break down plastic or plants that grow faster.
For instance, synthetic biology has been used to engineer yeast cells that can produce medicines like insulin. This type of research is paving the way for sustainable solutions to medical and environmental problems.
In epidemiology, researchers study how diseases spread within populations. By using disease modeling, scientists can predict outbreaks and design public health strategies to prevent the spread of infectious diseases. These models take into account factors like transmission rates, immunity, and social behavior.
For example, during the COVID-19 pandemic, epidemiologists used models to forecast how the virus would spread and what measures, like social distancing, could slow its progression. Public health officials rely on these models to make informed decisions.
Quantitative biology might sound technical, but it affects everyone. From better healthcare (through personalized medicine and disease modeling) to conservation efforts (by protecting species and ecosystems), the insights from this field shape the world we live in. Whether scientists are predicting how a virus spreads or figuring out how to grow more food in a changing climate, quantitative biology helps tackle global challenges.
Table: Key Research Areas in Quantitative Biology
Systems Biology | How biological networks function | How do genes interact in a cell? |
Bioinformatics & Genomics | DNA data and genetic information | How do genes determine traits? |
Population Genetics | Evolution and genetic diversity | How do populations adapt to their environment? |
Biophysics | Physical principles in biological systems | How do proteins fold inside cells? |
Quantitative Ecology | Ecosystem dynamics and environmental effects | How do species interact in an ecosystem? |
Neuroscience | Brain networks and cognitive functions | How do neurons form memories? |
Synthetic Biology | Designing and engineering biological systems | Can we create bacteria to produce medicine? |
Disease spread and public health | How can we model the next pandemic? |
As technology continues to advance, quantitative biology will become even more important in solving real-world problems. Whether you’re interested in medicine, ecology, genetics, or any other field, quantitative biology offers exciting opportunities to make a meaningful impact on society . It’s a field that continues to grow, offering new ways to understand and influence the living world.
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This chapter surveys the literature on the impact of minimum wages on low-wage labor markets. We describe and critically review the empirical methods in the new minimum wage literature, particularly those leveraging quasi-experimental variation. We provide a quantitative overview of the most recent evidence on the employment and wage effects of the policy, while also exploring emerging research on its impact on other margins, including amenities, other inputs (such as capital and high-skilled workers), firm entry and exit, output prices and demand, profits, and productivity. This approach allows us to present a comprehensive picture of how minimum wage policies affect firms, workers, and labor markets. We also review the evidence on the policy’s impact on wage inequality and income distribution. Finally, we discuss how these effects can vary depending on the economic context and the level of a country’s development.
We thank Akash Bhatt, Annie McGrew, Jon Piqueras, and Linda Wu for excellent research assistance. We are also grateful to David Card, Christian Dustmann, Larry Katz, Pat Kline, Thomas Lemieux, Alan Manning, Michael Reich, Liyang Sun and the participants of the Conference for the Handbook of Labor Economics, Volume 5 in Berlin for the valuable comments and insights. This research has been funded by the European Union’s Horizon 2020 research and innovation program (grant agreement number 949995). The views expressed herein are those of the authors and do not necessarily reflect the views of the National Bureau of Economic Research.
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A study of 137 leaders and their direct reports during the early stages of Covid-19 shows that men were more likely to resort to abusive behavior during stressful moments.
One of the oldest erroneous gender stereotypes is that women are too emotional to be effective leaders, especially in uncertain times. Contrary to this belief, research on 137 leader-report pairs in Europe during the early stages of the Covid-19 pandemic indicates that women may actually be less likely to let their emotions negatively influence their leadership behaviors compared to men. During this time, women leaders reported higher anxiety levels but did not translate these emotions into abusive behaviors, unlike their male counterparts who exhibited more hostile supervision when anxious. Women typically engaged in family-supportive behaviors regardless of their emotional state. The research emphasizes the importance of recognizing the unique strengths women bring to leadership roles, especially their capacity to lead compassionately and prioritize others, but also notes that caring leadership behaviors are evaluated differently based on the gender of the leader. The study calls for more inclusive research that addresses diverse gender identities and cultural contexts.
One of the oldest and most persistent gender stereotypes is that women are too emotional. This stereotype hurts women’s leadership prospects as they are seen as less fit for leader roles because they are perceived to be more likely to make irrational, emotion-driven decisions than men.
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About half of U.S. adults (52%) lived in middle-income households in 2022, according to a Pew Research Center analysis of the most recent available government data. Roughly three-in-ten (28%) were in lower-income households and 19% were in upper-income households.
Our calculator below, updated with 2022 data, lets you find out which group you are in, and compares you with:
Find more research about the U.S. middle class on our topic page .
Our latest analysis shows that the estimated share of adults who live in middle-income households varies widely across the 254 metropolitan areas we examined, from 42% in San Jose-Sunnyvale-Santa Clara, California, to 66% in Olympia-Lacey-Tumwater, Washington. The share of adults who live in lower-income households ranges from 16% in Bismarck, North Dakota, to 46% in Laredo, Texas. The share living in upper-income households is smallest in Muskegon-Norton Shores, Michigan (8%), and greatest in San Jose-Sunnyvale-Santa Clara, California (41%).
The calculator takes your household income and adjusts it for the size of your household. The income is revised upward for households that are below average in size and downward for those of above-average size. This way, each household’s income is made equivalent to the income of a three-person household. (Three is the whole number nearest to the average size of a U.S. household , which was 2.5 people in 2023.)
Pew Research Center does not store or share any of the information you enter.
We use your size-adjusted household income and the cost of living in your area to determine your income tier. Middle-income households – those with an income that is two-thirds to double the U.S. median household income – had incomes ranging from about $56,600 to $169,800 in 2022. Lower-income households had incomes less than $56,600, and upper-income households had incomes greater than $169,800. (All figures are computed for three-person households, adjusted for the cost of living in a metropolitan area, and expressed in 2022 dollars.)
The following example illustrates how cost-of-living adjustment for a given area was calculated: Jackson, Tennessee, is a relatively inexpensive area, with a price level in 2022 that was 13.0% less than the national average. The San Francisco-Oakland-Berkeley metropolitan area in California is one of the most expensive, with a price level that was 17.9% higher than the national average. Thus, to step over the national middle-class threshold of $56,600, a household in Jackson needs an income of only about $49,200, or 13.0% less than the national threshold. But a household in the San Francisco area needs an income of about $66,700, or 17.9% more than the U.S. threshold, to be considered middle class.
The income calculator encompasses 254 of 387 metropolitan areas in the United States, as defined by the Office of Management and Budget . If you live outside of one of these 254 areas, the calculator reports the estimates for your state.
The second part of our calculator asks about your education, age, race or ethnicity, and marital status. This allows you to see how other adults who are similar to you demographically are distributed across lower-, middle- and upper-income tiers in the U.S. overall. It does not recompute your economic tier.
Note: This post and interactive calculator were originally published Dec. 9, 2015, and have been updated to reflect the Center’s new analysis. Former Senior Researcher Rakesh Kochhar and former Research Analyst Jesse Bennett also contributed to this analysis.
The Center recently published an analysis of the distribution of the American population across income tiers . In that analysis, the estimates of the overall shares in each income tier are slightly different, because it relies on a separate government data source and includes children as well as adults.
Pew Research Center designed this calculator as a way for users to find out, based on our analysis, where they appear in the distribution of U.S. adults by income tier, as well as how they compare with others who match their demographic profile.
The data underlying the calculator come from the 2022 American Community Survey (ACS). The ACS contains approximately 3 million records, or about 1% of the U.S. population.
In our analysis, “middle-income” Americans are adults whose annual household income is two-thirds to double the national median, after incomes have been adjusted for household size. Lower-income households have incomes less than two-thirds of the median, and upper-income households have incomes more than double the median. American adults refers to those ages 18 and older who reside in a household (as opposed to group quarters).
In 2022, the national middle-income range was about $56,600 to $169,800 annually for a household of three. Lower-income households had incomes less than $56,600, and upper-income households had incomes greater than $169,800. (Incomes are calculated in 2022 dollars.) The median adjusted household income used to derive this middle-income range is based on household heads, regardless of their age.
These income ranges vary with the cost of living in metropolitan areas and with household size. A household in a metropolitan area with a higher-than-average cost of living, or one with more than three people, needs more than $56,600 to be included in the middle-income tier. Households in less expensive areas or with fewer than three people need less than $56,600 to be considered middle income. Additional details on the methodology are available in our earlier analyses .
Richard Fry is a senior researcher focusing on economics and education at Pew Research Center .
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ABOUT PEW RESEARCH CENTER Pew Research Center is a nonpartisan, nonadvocacy fact tank that informs the public about the issues, attitudes and trends shaping the world. It does not take policy positions. The Center conducts public opinion polling, demographic research, computational social science research and other data-driven research. Pew Research Center is a subsidiary of The Pew Charitable Trusts , its primary funder.
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Tuberculosis is the leading cause of death from a single infectious agent, with over 25% of these occurring in the African region. Multi-drug resistant strains which do not respond to first-line ...
Introduction. Tuberculosis (TB) continues to pose a major threat to global health , and research is a key component of the Global Plan to Stop TB2011-2015 .Research is particularly critical for developing new tools and approaches needed for eliminating TB by 2050 .Recognizing this, the Stop TB Partnership and the World Health Organization's (WHO) Stop TB Department have launched the TB ...
Introduction. Tuberculosis (TB) represents a major global health threat that, despite being preventable and treatable, is the 13th leading cause of death worldwide and the second leading infectious killer after coronavirus disease 2019 (COVID-19) [1, 2].In the past decades, the TB burden has been slowly decreasing; however, with the emergence of COVID-19 and the current political conflicts ...
The TB Epidemiologic Studies Consortium (TBESC) was established to strengthen, focus, and coordinate TB programmatic research. Since 2001, TBESC external partners have conducted epidemiologic and operational research to find better approaches to TB control and prevention. Keep Reading: Tuberculosis Epidemiologic Studies Consortium.
7. TB research and innovation. Tuberculosis (TB) research and innovation is essential to achieve the global TB targets of the United Nations (UN) Sustainable Development Goals (SDGs) and the World Health Organization (WHO) End TB Strategy. The SDG target is to "end the epidemic" by 2030; more specific targets for 2030 set in the End TB ...
Tuberculosis research. Tuberculosis is the leading cause of death from a single infectious agent and remains a global health emergency. In 2018 alone, there were 1.5 million deaths and 10 million new cases globally, among whom half a million had rifampicin resistant TB.
Tuberculosis Trials Consortium (TBTC) is a unique collaboration of researchers from CDC, domestic and international public health departments and academic medical centers, and selected Veterans Administration medical centers. TBTC's mission is to conduct programmatically relevant research concerning the diagnosis, clinical management, and ...
Tuberculosis (TB) is a major cause of morbidity and mortality worldwide. It is estimated that 25% of the world's population are infected with Mycobacterium tuberculosis, with a 5-10% lifetime risk of progression into TB disease. Early recognition of TB disease and prompt detection of drug resistance are essential to halting its global burden.
The Burden of Bacteriologically Negative TB Diagnosis: A Four‐Year Review of Tuberculosis Cases at a Tertiary Facility. Jane S. Afriyie-Mensah, Robert Aryee, Francisca Zigah, Ernest Amaning-Kwarteng, Marie Nancy Séraphin. First Published: 23 December 2023. Abstract.
Test and treat approach for tuberculosis infection amongst household contacts of drug-susceptible pulmonary tuberculosis, Mumbai, India. Mycobacterium's "Personal Protective Equipment": the role of PE/PPE proteins in protecting against host defenses. iValiD-TB: A fully characterized Mycobacterium tuberculosis dataset for antimicrobial ...
Tuberculosis diagnosis, drug resistance, and drug target discovery. Robert Jansen. Xueqiong Wu. Lin Fan. RANJAN NANDA. 25,228 views. 17 articles. A multidisciplinary journal focused on understanding the mechanisms behind the development, progression, treatment of tuberculosis and non-tuberculous mycobacterial infections.
This Topic aims to propel clinical as well as basic research in the area of TB treatment, disease management, drug discovery and understanding the metabolic re-modelling of Mycobactrium tuberculosis as a pathogen in response to various drugs. We aspire to reach new heights in diagnosis, treatment and control of the tuberculosis epidemic, worldwide.
6. TB research and innovation. Tuberculosis (TB) research and innovation is essential to achieve global TB targets for reductions in TB incidence and TB deaths. The targets of the WHO End TB Strategy (1), adopted in 2014, required a global rate of decline in TB incidence of 17% per year between 2025 and 2035, compared with a baseline level of 2 ...
Tuberculosis (TB) research and innovation is essential to achieve global TB targets for reductions in TB incidence and TB deaths. The targets of the WHO End TB Strategy (1), adopted in 2014, required a global rate of decline in TB incidence of 17% per year between 2025 and 2035, compared with a baseline level of 2% per year in 2015 and 10% per ...
Introduction. Tuberculosis (TB) continues to pose a major threat to global health , and research is a key component of the Global Plan to Stop TB2011-2015 .Research is particularly critical for developing new tools and approaches needed for eliminating TB by 2050 .Recognizing this, the Stop TB Partnership and the World Health Organization's (WHO) Stop TB Department have launched the TB ...
We used the UK Health Research Classification System (HRCS) to help us classify the research questions and priorities. The three most common research topics were in the area of detection, screening and diagnosis of TB (32.6%), development and evaluation of treatments and therapeutic interventions (23.4%), and TB aetiology and risk factors (19.9%).
Systematic reviews are increasingly informing policies in pediatric tuberculosis (TB) care and control. However, there is a paucity of information on pediatric TB research priorities. ... The four most common research topics in the area of detection were 43.33% screening and diagnosis of TB, 23.33% evaluation of treatments and therapeutic ...
Tuberculosis aims to publish original research and reviews. It publishes articles on host response and immunology of tuberculosis and the molecular biology, genetics and physiology of the organism. Submissions on bacteriological, immunological and pathogenesis aspects of the disease are particularly welcomed. The journal publishes topics including:
Tuberculosis. Tuberculosis (TB) is a contagious disease caused by infection with Mycobacterium tuberculosis (Mtb) bacteria. It is spread through the air when a person with TB disease of the lungs or throat coughs, speaks or sings, and people nearby breathe in these bacteria and become infected. TB typically affects the lungs, but it can also ...
High-quality research evidence is critical for improving global health and health equity, and for achieving the World Health Organization (WHO)'s objective of the attainment of the highest possible level of health by all peoples [1]. This need is most apparent when responding to complex epidemics such as tuberculosis (TB). TB is the leading killer among diseases caused by an infectious agent ...
Several NIH research and research training programs are helping to reduce the impact of tuberculosis both in the U.S. and overseas. Grant Awards Related to TB. View a list of Fogarty grant awards related to tuberculosis (TB). Recent News. Treatment Outcomes for Tuberculosis Infection and Disease Among Persons Deprived of Liberty, Uganda, 2020
Tuberculosis is the top infectious disease globally, driven by transmission and progression from latent to infectious disease. ... This Topic Collection seeks to highlight recent advancements in TPT, particularly among high-burden countries and household contacts, welcoming diverse research approaches. Submissions Open | Submission Deadline ...
Tuberculosis, or TB, is an infectious bacterial disease caused by Mycobacterium tuberculosis, which most commonly affects the lungs. It is transmitted from person to person via droplets from the throat and lungs of people with the active respiratory disease. But people infected with TB bacilli will not necessarily become sick with the disease.
200+ Experimental Quantitative Research Topics For STEM Students In 2023; 7. Synthetic Biology: Building New Life. Synthetic biology is an exciting field of biotechnology in which researchers design and create new biological systems or organisms. Using principles from genetic engineering, scientists can modify or build DNA sequences to produce ...
Every £1 of public spending on research and development in the UK stimulates between £1.96 and £2.34 of private ... Follow the topics in this article UK industrial strategy Add to myFT.
Founded in 1920, the NBER is a private, non-profit, non-partisan organization dedicated to conducting economic research and to disseminating research findings among academics, public policy makers, and business professionals.
One of the oldest erroneous gender stereotypes is that women are too emotional to be effective leaders, especially in uncertain times. Contrary to this belief, research on 137 leader-report pairs ...
A study of 137 leaders and their direct reports during the early stages of Covid-19 shows that men were more likely to resort to abusive behavior during stressful moments.
About half of U.S. adults (52%) lived in middle-income households in 2022, according to a Pew Research Center analysis of the most recent available government data. Roughly three-in-ten (28%) were in lower-income households and 19% were in upper-income households. Our calculator below, updated with ...
High Tech Hybrid-Electric. The work is happening as part of NASA's Hybrid Thermally Efficient Core (HyTEC) project. This work intends to demonstrate this engine concept by the end of 2028 to enable its use on airliners as soon as the 2030s.. It represents a major step forward in jet engine technology.